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한국 인삼 밭 토양에서 분리한 진세노이드 전환능력이 있는 Panacibacter ginsenosidivorans Gsoil 1550 T의 유전체 서열 분석

Complete genome sequence of Panacibacter ginsenosidivorans Gsoil 1550 T , a ginsenoside-converting bacterium, isolated from soil of a ginseng field

미생물학회지 2019년 55권 4호 p.456 ~ 458
금동호 ( Keum Dong-Ho ) - 국립한경대학교 논업생명과학대학 생명공학과

이병희 ( Lee Byoung-Hee ) - 국립생물자원관 미생물자원과
이기은 ( Lee Ki-Eun ) - 국립생물자원관 미생물자원과
이순열 ( Lee Soon-Youl ) - 국립한경대학교 논업생명과학대학 생명공학과
임완택 ( Im Wan-Taek ) - 국립한경대학교 논업생명과학대학 생명공학과

Abstract


A yellow-colored, long rod baterial strain of low convexity, designated Panacibacter ginsenosidivorans Gsoil 1550 T was isolated from soil of a ginseng field collected in Pocheon, Republic of Korea. Gsoil 1550 T showed the ability to convert major ginsenosides Rb1, Rc, and Rd to minor ginsenoside F2, and its whole genome was sequenced. The whole genome sequence of Panacibacter ginsenosidivorans Gsoil 1550 T consisted of one circular chromosome of 5,528,026 bp, with 44.6% G + C content. Of the 4,657 predicted genes, 4,572 were proteincording genes, 52 were RNAs, and 33 were pseudogenes. From the complete genome sequence of the strain Gsoil 1550 T , we found several glycoside hydrolase-encoding genes that may be involved in the conversion of major ginsenosides into minor ginsenosides, antibiotic biosynthesis-encoding genes, and cobalamin B12-binding domain-containing genes.

키워드

Panacibacter ginsenosidivorans; complete genome; ginseng soil; glycoside hydrolase; PacBio RS II
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