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Organizing an in-class hackathon to correct PDF-to-text conversion errors of Genomics & Informatics 1.0

Genomics & Informatics 2020년 18권 3호 p.33 ~ 33
김선호, 김로영, 남희조, 김려경, 고은진, 김한수, 신지혜, 조다은, 진유리, 배소연, 조예원, 정산아, 김예나, 안서연, 장보미, 성지현, 이유진, 서시은, 김유진, 김하정, 김혜지, 성혜린, 노효영, 구재원, 추지온, 임주원, 이영주, 이경연, 임유리, 김명은, 황선정, 한신혜, 배소현, 김수아, 유수현, 서연정, 신예림, 김연수, 고유정, 백지희, 현혜진, 최혜민, 오지혜, 김다영, 박현석,
소속 상세정보
김선호 ( Kim Sun-Ho ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
김로영 ( Kim Ro-Young ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
남희조 ( Nam Hee-Jo ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
김려경 ( Kim Ryeo-Gyeong ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
고은진 ( Ko En-Jin ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
김한수 ( Kim Han-Su ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
신지혜 ( Shin Ji-Hye ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
조다은 ( Cho Da-Eun ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
진유리 ( Jin Yu-Rhee ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
배소연 ( Bae So-Yeon ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
조예원 ( Jo Ye-Won ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
정산아 ( Jeong San-Ah ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
김예나 ( Kim Ye-Na ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
안서연 ( Ahn Seo-Yeon ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
장보미 ( Jang Bo-Mi ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
성지현 ( Seong Ji-Heyon ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
이유진 ( Lee Yu-Jin ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
서시은 ( Seo Si-Eun ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
김유진 ( Kim Yu-Jin ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
김하정 ( Kim Ha-Jeong ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
김혜지 ( Kim Hye-Ji ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
성혜린 ( Sung Hye-Lynn ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
노효영 ( Lho Hyo-Young ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
구재원 ( Koo Jay-Won ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
추지온 ( Chu Ji-On ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
임주원 ( Lim Ju-Won ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
이영주 ( Kim Young-Ju ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
이경연 ( Lee Kyung-Yeon ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
임유리 ( Lim Yu-Ri ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
김명은 ( Kim Meong-Eun ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
황선정 ( Hwang Seon-Jeong ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
한신혜 ( Han Shin-Hye ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
배소현 ( Bae So-Hyeun ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
김수아 ( Kim Su-A ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
유수현 ( Yoo Su-Hyeon ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
서연정 ( Seo Yeon-Jeong ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
신예림 ( Shin Ye-Rim ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
김연수 ( Kim Yon-Soo ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
고유정 ( Ko You-Jung ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
백지희 ( Baek Ji-Hee ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
현혜진 ( Hyun Hye-Jin ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
최혜민 ( Choi Hye-Min ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
오지혜 ( Oh Ji-Hye ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
김다영 ( Kim Da-Young ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory
박현석 ( Park Hyun-Seok ) - Ewha Womans University ELTEC College of Engineering Bioinformatics and Natural Language Processing Laboratory

Abstract


This paper describes a community effort to improve earlier versions of the full-text corpus of Genomics & Informatics by semi-automatically detecting and correcting PDF-to-text conversion errors and optical character recognition errors during the first hackathon of Genomics & Informatics Annotation Hackathon (GIAH) event. Extracting text from multi-column biomedical documents such as Genomics & Informatics is known to be notoriously difficult. The hackathon was piloted as part of a coding competition of the ELTEC College of Engineering at Ewha Womans University in order to enable researchers and students to create or annotate their own versions of the Genomics & Informatics corpus, to gain and create knowledge about corpus linguistics, and simultaneously to acquire tangible and transferable skills. The proposed projects during the hackathon harness an internal database containing different versions of the corpus and annotations.

키워드

biomedical text mining; corpus; text analytics

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