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Draft genome sequence of the polysaccharide degrading bacterium Cytophagaceae strain SJW1-29

미생물학회지 2020년 56권 4호 p.422 ~ 425
백기운, 최아영,
소속 상세정보
백기운 ( Baek Ki-Woon ) - Nakdonggang National Institute of Biological Resources
최아영 ( Choi Ah-Young ) - Nakdonggang National Institute of Biological Resources

Abstract


Draft genome sequencing of the Cytophagaceae strain SJW1-29, isolated from the Seomjin River in Korea, was performed using the PacBio platform. The draft genome was composed of 7,065,248 bp with a G + C content of 50.7%. Genome annotation revealed that the genome comprised 5,684 protein-coding genes, 9 rRNA genes, 41 tRNA genes, 2 ncRNA genes, and 273 pseudo genes. Genome analysis revealed that the strain SJW1-29 harbors several carbohydrate active enzymes, which are provides insights for understanding the polysaccharide degradation system of the strain at the genome level.

키워드

Cytophagaceae; draft genome sequence; PacBio

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