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Complete genome sequence of Parasphingopyxis sp. CP4, an asparaginase-producing marine bacterium

미생물학회지 2020년 56권 4호 p.426 ~ 429
권용민, 정다운, 조은서, 양영익,
소속 상세정보
권용민 ( Kwon Yong-Min ) - National Marine Biodiversity Institute of Korea
정다운 ( Chung Da-Woon ) - National Marine Biodiversity Institute of Korea
조은서 ( Cho Eun-Seo ) - National Marine Biodiversity Institute of Korea
양영익 ( Yang Young-Ik ) - National Marine Biodiversity Institute of Korea

Abstract


A novel marine bacterium belonging to the genus Parasphingopyxis designated as strain CP4 was isolated from seawater around Chujado island in Korea. In the present study, we report the complete genome of Parasphingopyxis sp. CP4, which was determined using a hybrid approach combining the PacBio RS II and Illumina HiSeq platforms. The genome consists of one circular chromosome of 2,963,413 bp with a G + C content of 58.55 mol%. Furthermore, the genome contains 2,867 proteincoding sequences, 3 rRNA genes, 44 tRNA genes, 4 non-coding RNA genes, and 9 pseudogenes. The CP4 strain harbors asparaginase genes, which have applications in the field of clinical research pharmacology and in the food industry.

키워드

Sphingomonadaceae; Parasphingopyxis; asparaginase; Chujado island; genome

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